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国家高技术研究发展计划(2005BA711A09)

作品数:3 被引量:4H指数:2
相关作者:金奇杨剑彭俊平张笑冰杨娥更多>>
相关机构:中国疾病预防控制中心传染病预防控制国家重点实验室更多>>
发文基金:国家高技术研究发展计划更多>>
相关领域:医药卫生生物学更多>>

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应用全基因组PCR扫描方法进行猪链球菌基因组结构的比较分析
2007年
2005年,在中国四川局部地区爆发人感染猪链球菌疫情,因其感染人数多,病死率高引起关注,为了确定该致病菌是否发生变异,通过应用全基因组PCR扫描方法(WGPScaning)、多位点序列分型技术(MLST)以及毒力相关基因的序列测定,比较分别来自本次疫情中的病人和病猪、以前流行期间感染的病人分离的菌株以及网上公布的来自欧洲的猪链球菌基因组序列,结果显示各菌株的基因组结构相似,毒力相关基因没有差异,所有菌株都属于ST1序列群,说明本次引起四川疫情的菌株未发生明显的基因组结构的改变.
熊朝晖卫灿东杨剑彭俊平徐星烨王宇金奇
关键词:猪链球菌多位点序列分型
Characterization of serogroup C meningococci isolated from 14 provinces of China during 1966—2005 using comparative genomic hybridization被引量:2
2007年
Neisseria meningitidis is a major cause of bacterial meningitis and septicemia worldwide. In China, serogroup A strains were responsible for over 95% of the cases, while serogroup B strains were mainly the cause of localized outbreaks and sporadic cases. Before 2003, serogroup C strains were only re-covered from a few sporadic cases. However, a sudden increase in the number of cases due to sero-group C strains occurred during 2003—2005 in Anhui Province, China. Many cases were found in other provinces at the same time. Multilocus sequence typing (MLST) results indicated that the unique se-quence type 4821 clone meningococci, a new hyper-virulent lineage, was responsible for the serogroup C meningitis outbreaks. We have completed the project of sequencing the whole genome of the Chi-nese N. meningitidis serogroup C representative isolate 053442. We fabricated a whole-genome mi-croarray of N. meningitidis isolate 053442 and analyzed the genome composition differences among 81 serogroup C isolates which were isolated from 14 provinces of China during 1966—2005. The com-parative genomic hybridization (CGH) result shows that the genome compositions of nearly all sero-group C isolates are similar to that of 053442. The products of many absent open reading frames (ORFs) are conserved hypothetical proteins. The results will provide a valuable resource from which one can analyze the genome composition and genetic background of serogroup C meningococci in China.
PENG JunPing1, ZHANG XiaoBing1, YANG E1, WANG Jing1, YANG Jian1, SHAO ZhuJun2, 3 & JIN Qi1 1 State Key Laboratory for Molecular Virology and Genetic Engineering, Beijing 100052, China
关键词:MENINGITIDISCOMPARATIVEGENOMICHYBRIDIZATION
1966~2005年中国14个省、市C群脑膜炎球菌比较基因组学分析被引量:2
2007年
脑膜炎球菌是世界范围内引起细菌性脑膜炎和败血症的主要病原体,在中国一直以A群流行为主,未发生过B群和C群的流行.2003年以来,安徽省出现多次由C群脑膜炎球菌引起的流行性脑膜炎爆发,而且在全国其他省、市也有大量病例出现.多位点序列分型结果表明,序列型(sequence type,ST)4821菌株主要引起了这些爆发.在完成我国C群脑膜炎球菌的代表株053442的全基因组序列测定工作的基础上,我们构建了全基因组DNA微阵列,对1966~2005年分离于中国14个省、市的81株C群脑膜炎球菌进行了比较基因组杂交分析.结果显示:绝大部分菌株的基因组组成相似,部分基因有一定的缺失和变异,而且很多缺失基因是推测的保守基因.为深入了解我国C群脑膜炎球菌的基因组组成特点,为初步揭示其遗传背景奠定了基础.
彭俊平张笑冰杨娥王璟杨剑邵祝军金奇洪涛(推荐)
关键词:脑膜炎球菌比较基因组杂交
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